Original inside /usr/local/lxlabs/kloxo/file/apache/tpl and /usr/local/lxlabs/kloxo/file/nginx/tpl. Running cleanup will be copy this dirs to /home/apache/tpl and /home/nginx/tpl.
Finally I found a bug:
Create domain, then enable www redirect, then enable wildcards with *.
Then go to General Settings and change webmail from --chooser-- to for example afterlogic.
Run:
/script/fixweb
/script/fixphpfpm
/etc/init.d/httpd restart
/etc/init.d/nginx restart
/etc/init.d/php-fpm restart
then go to webmail.domain.com and you will see your page instead of webmail :/
I was able to recreate it for both alpha and final...