If you found service error, try this tricks. Switch dns and web server to other and then switch back. The same ways for php-branch and php-type.
To make sure, after previous steps, run 'sh /script/fix-all; sh /script/restart-all'. Inform here if you found error/warning/alert in fix-all and restart-all steps.
Content '<VirtualHost *:80>' is normal in Kloxo-MR and this approach better then Kloxo approach.